Johannes Rainer
Johannes Rainer
After updating from kernel 5.17 (5.17.9-arch1-1) to kernel 5.18 I'm unable to run macOS with the docker images. I've tried it with the Monterey image which runs nicely with the...
Hi Bernat! I've realized that `kpPlotRegions` has an argument `avoid.overlapping` to stack regions and avoid overlapping them - would be nice if `kpPlotTranscripts` had also the same option.
Excellent work! I was just wondering whether you could think of supporting the Bioconductor `AnnotationFilter` for the subsetting of a plot, e.g. with a call such as: `plotKaryoType(filter = ~...
I made a sticker for Bioconductor package reviewers. I'm actually quite happy with it but feedback is welcome (maybe @lshep ?) - if OK I'll add it to the repo....
I guess there's need for a sticker for [BioC2022](https://bioc2022.bioconductor.org/). Marcel (@LiNk-NY) do you want to take over that one - or anybody else? Alternatively, I could also give it a...
Seems the sticker for the BiocAsia2020 is missing. @kozo2 @mritchie can anyone of you maybe add that sticker?
In addition to the 2 stickers listed [here](https://github.com/Bioconductor/BiocStickers/blob/master/Bioconductor/README.md) I remember vaguely that there was another one designed by Dan Bunis. If that's true, can you please add that one too...
The last changes to `hexSticker` (see issue https://github.com/GuangchuangYu/hexSticker/issues/6) break (almost?) all R scripts to create the stickers. Update the scripts to create the stickers using the new `hexSticker` package.
This is related to issue #612: Expand functionality of `plotChromatogramsOverlay` to: - support stacking of chromatograms by sample/index. Maybe add parameter `stackingBy = c("mz", "index")` to switch stacking mode. -...
The `featureSpectra` allows to extract MS1 spectra for each features from an `XCMSnExp`. To extract the MS1 spectra closest to the apex position of the chromatographic peaks associated with the...