Jonathan Taylor

At a high level, I'd like to use jupytext to pair one or several executable docs (.ipynb) to one in which the emphasis is on text rather than on code....

Hmm... AFAIK papers that get published in stats journals are usually LaTeX, and many / most (?) theses are written in LaTeX (yes you can write it in e.g. R...

I think this still fails for `alpha=0, beta>0` (i.e. when `l1_ratio=0`). In this case, because `const=0` [here](https://github.com/scikit-learn/scikit-learn/blob/02e09e3d10c635094a88db41bede022106d9da48/sklearn/linear_model/_cd_fast.pyx#L239) `gap` is 0.5 * ((R**2).sum() + beta * (w**2).sum()). Or am I misreading...

Using a Lagrangian from this constrained problem always (i.e. regardless of whether or not alpha,beta is 0) gives non-trivial lower bounds minimize_(w,v subject to v=Xw) 0.5 * \|y-v\|^2_2 + \alpha...

Not sure why it should raise a warning. Coordinate descent works fine on this problem (it's strongly convex). Also, the issue raises a huge number of warnings in the `ElasticNet.path`....

Related perhaps. Is it possible to output the info used in computing the chi-squared in e.g. `multivariate_logrank_test`? Although covariance is rank deficient, looking at the (accumulated) values of observed and...

See https://github.com/dswah/pyGAM/pull/302

An issue with this fix is that the standard error of the bars will depend on where we evaluate. Might be better to return \hat{\mu}(X_grid)-\hat{\mu}(\bar{X}). So it would be evaluated...

Hmm... this line is a bit curious -- why center here? https://github.com/dswah/pyGAM/blob/b57b4cf8783a90976031e1857e748ca3e6ec650b/pygam/pygam.py#L1259 Perhaps this is to try to separate into linear and non-parametric parts but I don't think this centering...

For models with linear terms only and `lam=0`, the p-values do agree with `statsmodels.OLS`. Including a factor the p-values do not agree. One thing I do see is that you...