Jonas Lundholm Bertelsen

I ran into this issue as well with the 0.69 "devel" version on an ext4 filesystem (unlike OP it was a separate harddrive though). I guess the really interesting part...

You could namespace things as `sisl_toolbox.tb_models...`? So that different types (H, dynmat, etc.) could share a particular geometry. And different implementations (eg. nearest neighbor vs 3rd nearest) would be in...

Is it because you are thinking of making the format identical to ion.nc files? I think for spgeom netcdf's it would be simpler to insist on the explicit format. If...

I haven't really dived much into the visualization/plotting module of Pol, so my insight there is a bit limited. But in the end I think plotting graphs is quite different...

> This might be an issue for other methods that return new geometries (not copied ones), I haven't checked. Perhaps an `inplace` keyword could be used instead -- then name...

So I at least used to think that methods should mostly preserve names whenever they can. But I had some discussions with Nick over complexities that arise with names when...

The cell vectors are in both `geom.cell` and `geom.sc.cell`, right? Perhaps an idea would be that this ambiguity should be resolved entirely rather than just giving them new names. For...

Okay -- but if not `supercell` then I think that `cell` is the only other reasonable option (that I can think of). The existing `cell` should then be removed in...

This I did with an entirely custom script - ie not using the Phonons command.

IANAL but i think it's ["nominative use"](https://en.wikipedia.org/wiki/Nominative_use), ie. the equivalent of fair use for trademarks.