Jonah Cullen

I found it a little challenging to come up with a good analogy on the spot during the instructor training workshop. I was wondering if it might be beneficial to...

Thanks for your response! I installed vcflib via Bioconda (`mamba install -c bioconda vcflib`). I tend to use `mamba` as opposed to `conda` but I'm happy to try a different...

Hi @pettyalex , yes I’m trying to run this on an HPC with mostly AMD and Intel processors. If the bioconda recipe is fixed, I’ll try that again but if...

Is there a solution or workaround for this? I'm seeing this same thing without any per-rule `conda` directives (`snakemake` v8.4.7 installed via `conda`).

Oh my I swear I did that but apparently it failed. Upon re-updating, it worked and fixed the problem! Thank you very much for your prompt response! As a quick...

Apologies I should have looked a little closer and reported the `isoLabel` that is causing the issue - `-$16:G>A,19:T>C,20:G>A` with the full line (excluding RPMs): ``` TGGAATGTAAGGAAGTATGCAG eca-miR-1$eca-miR-206 eca-mir-1-2$eca-mir-1-1$eca-mir-206-2 nta#G|nta#G#1$NucVar...

Thank you for your response! I do not know what `-` means here, it occurs rarely along side other variants (e.g.`18:A>G`) but always causes an error when it is the...