Joanna Kelley

Yes, we are using the latest version and it is not working.

Still does not work. On Fri, Dec 6, 2019 at 2:42 AM Nicolas Dierckxsens wrote: > Hi, can you try with this version, if it works al upload it >...

I have attached the log. On Mon, Dec 9, 2019 at 2:47 AM Nicolas Dierckxsens wrote: > Hi, > > That's weird, it works for me on those read ids.....

Interestingly, your script works on those reads when they are unzipped but not the gz file. Is there a way to get it to work on the gz file? On...

Can you try with the gz files? It does not work for me. I tried with perl/5.28.0 and just a subset of the reads gzipped. It does not work. I...

Attached. [EP031.R2.12000.fastq.gz](https://github.com/ndierckx/NOVOPlasty/files/3944864/EP031.R2.12000.fastq.gz) [EP031.R1.12000.fastq.gz](https://github.com/ndierckx/NOVOPlasty/files/3944865/EP031.R1.12000.fastq.gz)

It was the trailing space! On Tue, Dec 10, 2019 at 4:58 AM Nicolas Dierckxsens < [email protected]> wrote: > Hi it works fine for me, so I am not sure...

We are also having this issue, thanks!

Traceback (most recent call last): File "/usr/local/bin/biom", line 5, in from pkg_resources import load_entry_point File "/usr/lib/python2.7/dist-packages/pkg_resources/__init__.py", line 2927, in @_call_aside File "/usr/lib/python2.7/dist-packages/pkg_resources/__init__.py", line 2913, in _call_aside f(*args, **kwargs) File "/usr/lib/python2.7/dist-packages/pkg_resources/__init__.py",...

That's not working either: > biocLite("biomformat") BioC_mirror: https://bioconductor.org Using Bioconductor 3.2 (BiocInstaller 1.20.3), R 3.3.2 (2016-10-31). Installing package(s) ‘biomformat’ Warning message: package ‘biomformat’ is not available (for R version 3.3.2)