JoeG

I was hoping to use withTimeout() with mclapply(), but when there is a timeout exception, mclapply() quits if mc.cores>1. mclapply() works fine if mc.cores=1. Any suggestions? ``` foo

Dear bamUtils, I'm using `bam clipOverlap --stats --poolSize 100000000 --in PE.bam --out merge.bam` and get reports like the below for a handful of files. The alignments all look clean before...

UMI '--rename' regex/utility

1

Hi cutadapt devs, I want to use cutadapt `--rename` to extract the meaningful portion of the UMI to the read name, but process the read to cut the entirety of...

Dockerized CHEUI

1

Dear CHEUI, Any chance you have created a docker, or could create one? Thanks

Permissions of download not default of user

1

**Versions** conda package: 16.15.0-ha770c72_2 ``` $ datasets --version datasets version: 16.15.0 ``` **Describe the bug** Any downloaded file has '600' permissions, but not the default of the user. Note that...