jo-mc

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Results 3 issues of jo-mc

svlen vs length of ALT

2 comment

Hi, I have noticed that the sequence length of inserts is often not quite the reported value in SVLEN. DEL seem to be correct. I havent had time to look...

Are calls made from supplementary alignments?

2 comment

Hello, I have a alignment with supplementary reads having an insertion. They do not appear to be in the VCF file. I had a quick look over documentation but did...

bug

pacbio isoseq data "A systematic benchmark of Nanopore long-read RNA sequencing for transcript-level analysis in human cell lines."

Hi, I cant seem to find any pacbio isoseq data (ideally bam) from recent (yesterday!) paper "A systematic benchmark of Nanopore long-read RNA sequencing for transcript-level analysis in human cell...