jkimsis comments

Repositories
Issues
Comments

Results 4 comments of


                                            jkimsis

Classification issues with similar taxonomic ids

Found the same issue with Delftia tsuruhatensis (id 180282) and Mycolicibacterium farcinogenes (id 1802)

Likelihood incorrectly calculated error

I've attached xmls and log output for two runs that failed like this (C and I), and one that ran all the way through (NO). I ran several processes in...

Likelihood incorrectly calculated error

Thank you, I'll experiment with that.

schmutzi.pl fails with and without prediction of the contaminant

I'm having the same issue with some files, while others from the same sequencing run are working fine. I aligned all of them with bwa aln -l 1024 -n 0.01...