Juhyun Kim comments

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                                            Juhyun Kim

vg rna crashed

I encountered the same error. Have you managed to find a solution for this issue?

question about fragment size distribiton and error(NestedPathAbundanceEstimator) when using short read illumina RNA seq data.

I couldn't resolve this yet, what was your read length estimation? Did you use illumina short read data?

question about fragment size distribiton and error(NestedPathAbundanceEstimator) when using short read illumina RNA seq data.

Hi @jeizenga, Kind reminder regarding this issue😁 Could you please leave a comment if you have any ideas? This is what error message states: ```bash Running rpvg (commit: 301f553412a7f3b3c3dccad74e845868da4f0468) Random...

Chromosome path not found in graph or haplotypes index

Hi, I have the same issue here. I generated the graph using minigraph Cactus with different reference samples (see below). seqFile | chm13,hg002.1, hg002.2 | chm13,hg002mat, hg002pat | hg002mat, hg002pat...