Julian Hahnfeld

## New feature Hi, it would be nice to have a `decompress` and `compress` parameter for the `collectFile` operator like for the splitX operators. ## Usage scenario Collect compressed files...

Hi, thank you for creating peptides.py. Some hydrophobicity tables together with certain proteins cause a runtime warning for in the function `auto_correlation()`: ```python import peptides for hydro in peptides.tables.HYDROPHOBICITY.keys(): print(hydro)...

Improve the diamond sORF search with paramaters adapted for small proteins.

This PR adds [sORFdb](https://sorfdb.computational.bio/) as an additional source for sORF annotations. The annotations are based on sORFdb families, have the lowest annotaion priority and are only added if no IPS...