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                                            Justin Cotney

Output bigwigs with macs2 p-value signal for every base-pair

Just getting into nextflow and this would be very helpful for us as well. This has to be done after the initial callpeak command. Use bdgcmp command to compare the...

Output bigwigs with macs2 p-value signal for every base-pair

> Just to add to @jcotney solution, ENCODE also have a pipeline to produce this data (which could be replicated in nextflow I guess): > > https://github.com/ENCODE-DCC/chip-seq-pipeline2 This is exactly...