jchenpku

stinger_local内存消耗

2

在windows7机器上跑stinger_local下载一晚上，第二天早上报错说机器内存不足，这个程序被系统自动关闭。机器内存是32G，一般占用不会超过50%

Could you please share the GTF file?

4

Illumina has updated their files and there's no genes.gtf in the hg19 version of either Homo_sapiens.zip or Homo_sapiens_hg19.zip. In fact there's no Archives folder at all.

squid errors

1

[Mon Oct 7 13:51:39 2019] Start reading bam file. [Mon Oct 7 13:51:58 2019] Finish sorting Chimeric bam reads. [Mon Oct 7 13:52:00 2019] Finish removing PCR duplicates. [Mon Oct...

I'm starting to use isolator. Here I have a few questions: what are up_pr down_pr and median_change mean in the tsv output files? If I only export the gene expression...

============================================ matplotlib ============================================ Installing python package via pip: matplotlib Command python setup.py egg_info failed with error code 1 in /tmp/pip_build_root/matplotlib Storing debug log for failure in /root/.pip/pip.log Installing python package...