Julia Casado Gómez-Pallete

Hello! I have this conda environment with the following packages: ``` active environment : bioinformatics-env active env location : /Users/julia/miniconda3/envs/bioinformatics-env shell level : 1 user config file : /Users/julia/.condarc populated...

Hello, I have a question of how to do both data integration and batch effect removal. I have previously posted [this issue](https://github.com/satijalab/seurat/issues/8797) where they introduced me in Data Integration. I...

Use this package with Seurat?

1

Hi! I have seen a very interesting reading using enrichplot in [Visualization of functional enrichment result](https://yulab-smu.top/biomedical-knowledge-mining-book/enrichplot.html#enrichplot) and I wanted to ask if there is a way of applying these codes...

Hello, I am trying to fit a series of DRM models with 2 different sets of inhibition values (2 very similar replicates) and the average of both. I don't knwo...

Color and size of nodes and edges dependent on other variables

2

Hi, I have realized that the enrichplot from [Bioconductor](https://rdrr.io/bioc/enrichplot/man/cnetplot.html) has been substituted by the enrichplot package in this [Github](https://rdrr.io/github/GuangchuangYu/enrichplot/man/cnetplot.html) repository and some functionalities that were previously available are not anymore....

viewPathway() colors

2

Hi, Is there an option in `viewPathway()` where I can color the nodes choosing my own scale? I would want something like, but `viewPathway()` does not return a ggplot object:...