Janet Berrios Wallace

@antortjim I am attempting to reuse my trained models on new, unseen videos, however, I keep encountering problems along the way. Were you able to successfully run feature_extractor.inference on new...

@antortjim Thank you so much for your help! Updating deepethogram completely remedied the issue and now it's working like a dream. Thank you for the advice and the quick reply!

Hi @gersgers, did you ever figure out a solution to this issue? I have attempted feeding in npx data as spikes binned (neuron x time -- e.g. histogram counts) and...

For my use case, I have sorted with kilosort and ingested the results into a MySQL database (i.e. datajoint). I am then querying the results and attempting to get the...

Got it! That worked! I was able to run it and successfully produce the raster. There were some dtype issues based on querying from the database. But going from object...

Following the issue since we are having the same issue. I have tried: installing with the yaml and fixing the numpy version -- same issue, installing/uninstalling PyQT libraries as @jonahpearl...

Unfortunately, it's not too informative: ``` (phy2) PS D:\Shijia\ecephys_NPfile_to_analyze\20240625_M212_4A25_g0\kilosort2.5_output\sorter_output> phy template-gui params.py --debug 12:55:41.257 [D] __init__:68 Start capturing exceptions. 12:55:41.441 [W] model:603 Unreferenced clusters found in templates (generally not a...

@jonahpearl It works on the analysis machine right next to the error-throwing one... no clue as to what is going on! The working one is Windows 10 and the non-working...

Hi @jonahpearl and @zm711, thank you both for the input! This is what I did that seems to fix it: - Ran windows updates and checked the firewall - Removed...