jamesamcl

Slash automatically added to URI with fragment and no path

5

``` > URI('http://example.com#foo').toString() 'http://example.com/#foo' ``` As far as I know, `http://example.com#foo` is a valid URI. This is quite a big issue for me because if the URI changes after loading/serialization,...

Reword intro to make it more polite

5

See issue #79

linuxulator: add sendfile fallback for non-socket FDs

1

In Linux < 2.6.33, sendfile could only be used to send from a file to a socket. This is the behaviour implemented by the FreeBSD Linuxulator. However, since 2.6.33, sendfile...

Copied from RT I am using the link below to get the descendants of diabetes. At the end of the link it shows that this page had total 78 id's...

When multiple labels are provided, which one should we use?

5

For example: As RDF triples are unordered, there is nothing to indicate in the OWL RDF/XML file which label of these is the preferred. So OLS would be equally justified...

The documentation of the config at https://www.ebi.ac.uk/ols/docs/installation-guide does not include preferred roots.

e.g. http://www.ebi.ac.uk/ols/api/ontologies/genepio/properties/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FIAO_0000114/jstree ``` java.lang.UnsupportedOperationException: Implementation not necessary. at [uk.ac](http://uk.ac/).ebi.spot.ols.neo4j.service.PropertyJsTreeBuilder.getJsTreeRoots(PropertyJsTreeBuilder.java:71) at [uk.ac](http://uk.ac/).ebi.spot.ols.neo4j.service.AbstractJsTreeBuilder.cachePreferredRoots(AbstractJsTreeBuilder.java:145) at [uk.ac](http://uk.ac/).ebi.spot.ols.neo4j.service.AbstractJsTreeBuilder.cacheRoots(AbstractJsTreeBuilder.java:131) at [uk.ac](http://uk.ac/).ebi.spot.ols.neo4j.service.AbstractJsTreeBuilder.getJsTree(AbstractJsTreeBuilder.java:82) at [uk.ac](http://uk.ac/).ebi.spot.ols.controller.api.OntologyPropertyController.getJsTree(OntologyPropertyController.java:211) ```

Solr config

1

Currently there are 2 different solr configs in the repo: * https://github.com/EBISPOT/OLS/tree/dev/ols-solr/src/main/solr-5-config * https://github.com/EBISPOT/OLS/tree/dev/ols-solr/src/main/solr-conf Need to work out which one to delete, and also update in dev for multilang.

e.g. for labels the label_property: could first try rdfs:label, if not then use preflabel etc.