Jaclyn Taroni

Thanks all for the replies. I am out of the office today, but I will run this with GNU time when I get back in early next week and see...

Hi @cjain7, When I run `/usr/bin/time` with `--verbose`, the output is: ``` Command terminated by signal 11 Command being timed: "mashmap -r reference.masked.genome.fa -q Homo_sapiens.GRCh38.cdna.all.fa -t 8 --pi 80 -s...

Hi @k3yavi, Thanks for the quick reply and the offer. I was planning on using the most recent Ensembl release for zebrafish. Here are the relevant links: ftp://ftp.ensembl.org/pub/release-96/fasta/danio_rerio/dna/Danio_rerio.GRCz11.dna.toplevel.fa.gz ftp://ftp.ensembl.org/pub/release-96/gtf/danio_rerio/Danio_rerio.GRCz11.96.gtf.gz Thanks...

Thank you very much @k3yavi and @rob-p!