Jack Freeman

icon indicating an email [email protected]

icon company The Morgridge Institute for Research icon location Madison, WI icon location Computational biologist interested in predictive diagnostic tools.

Results 4 comments of Jack Freeman

Visualize.py?

Hi @ccmeth - just checking in to see if you resolved your issue? While visualization.py was implemented in version 3.5, we have added functionality to process Isoquant runs from previous...

Visualize.py?

HI @ccmeth I see, thank you for the context. ".params" is a file (pickle serialization) we generate that captures all your parameters. Would you mind sending your isoquant.log? Thanks!

Visualize.py?

Thank you! I've identified the issue and will patch hopefully within the day!

Visualize.py?

hi @ccmeth I have opened up a PR that will address this issue! I know Andrey is OOO at the moment, so the changes are on the find_genes branch if...