Ivan Sovic

Results 30 comments of Ivan Sovic

> I usually do not check if malloc pointer is NULL, how likely is that to happen? I think it is always a good practice, though if you are allocating...

Hi Michal, How much memory does your machine have? The index construction will consume a huge amount of space in your case (though the final index should be smaller if...

Hi Mark, This is strange. Perhaps it's a data related issue, or a bug in parsing. Could you by any chance provide a direct link to the exact reference file...

Dear Amina, Thank you for testing and reporting back! You are right about exons being reported as separate SAM alignments. This was an intentional approach for the proof of concept....

Hi Rob! Hm this is interesting, there seems to be a problem with the alignment library. Let me look into this and report back soon. Thank you for such a...

Hi David, thank you for the detailed report! I'll take a thorough look soon - I'm currently working on the initial comment from this issue. Unfortunately, my time is a...

Dear Hajime, Thank you for your detailed bug report and patch suggestions! They were very valuable! The problem you reported, as well as the one reported by Rob, were both...

Hi David, I fixed the segfaults you reported earlier (and I hope this one is related to them), but the fixes are still not merged to master due to some...