irleader

> I recommend PCA. Hi, In the manuscript, you also talk about using PCA to do dimensionality reduction. "We then apply dimensionality reduction to these vectors using PCA down to...

Thanks a lot for your prompt answer. Is it possible to tell when will the next major release be avaialble? I will be waiting for the next release if it...

I am also wondering, the log pobability is natural log or log 10 based? I would like to trasnform the log probaility back to probability.

Also, is it possible to share with us the instanovo.pt checkpoint trained on HC-PT and has 'N(+.98)', 'Q(+.98)', and uses 'C(+57.02)' and 'M(+15.99)'? Thanks a lot!

Thanks a lot for your prompt answer! I will try with different mass_alphabet.txt. A few more questions: 1. "It is important to know though that fasta does not contain a...

As you have mentioned that you are using positional amino acid scores in the assembly, I am thinking of transforming output file from different de novo methods into a uniform...

I am now converting results from other methods all into the mztab format from casanovo and use Casanovo mode to do stitch assembly. I am wondering if stitch uses modification...

Thanks for your prompt answer! I might not use the raw data display capabilities and I would like to use a uniform format for all de novo methods. Thes easiest...