Carlo Kroll

Hsp alignment download reformat

11

FASTA headers of the downloaded HSP alignments now show the hit number and hsp number (in letters) that the user is currently looking at.

Ruby 3.1.2 update

6

With these updates SequenceServer is able to work on Ruby 3.1.2

The old docker-distroless image had some compatibility issues. During an analysis it would report an error during creation of a default output directory. ``` 2023-03-29 11:07:49.196 ERROR 1 --- [...

fixes #20

This issue was already handled in this [old PR ](https://github.com/monarch-initiative/curate-gpt/pull/11)but it had a commit mistake. A new PR will be made to have a cleaner history. When loading ontologies into...

migrate to uv

4

### Migrating to uv - [x] Update CI/CD - [x] Change build system (toml) - [x] update readme - [x] update contributing.md - [x] Update Dockerfile - [x] Update Makefiles...