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                                            Hung-Wei

Input file and genetic map requirement

Hi @hardingnj, Thank you for the quick and clear reply. For the second answer, you mentioned that "such as the availability of SNPs in both populations and population demographic history...

Question about plotting RCCR result and -s option in cross population analysis

Dear @stschiff, Thank you for the kind reply. For question 1, is it correct to set "ylim = c(0,1)" when plotting the RCCR result? Sometimes, the RCCR value is more...

Identify the homology of tetraploid genome

Thank you for the suggestions. The HiC contact map above is the result using HapHiC tool with Hi-C data and p_ctg.fasta generated from Hifiasm.