hfl112

I also didn't find the multiple run parameter, but in the documents, they mentioned this several times. Did you solve this problem

I also encounter the same error, you can downgrade pandas to 1.4.4. It works for me

> Thanks for using LightGBM. > > What component of LightGBM are you trying to install? e.g. the Python package, R package, CLI? > > If you are following the...

> python-pip Yes, I do have pip and can install the cpu version of lightGBM

I split my input by sampleID, then it worked. I guess you can only run scarHRD sample by sample

I think I got a very similar situation as you described, the only difference is I got ``` AttributeError: 'Namespace' object has no attribute 'func'``` when running conda -vvv. I...

I guess it' because of the somatic/germline forest gz files, if I remove those parameter, it works

I think there is something wrong with the gz files: Downloading resources/forests/germline.v0.7.4.forest.gz (374 MB) Error downloading object: resources/forests/germline.v0.7.4.forest.gz (926866d): Smudge error: Error downloading resources/forests/germline.v0.7.4.forest.gz (926866d922430204e527e685559373066801e1b288835480a44b0bc07ae8fe3d): batch response: This repository is...

I found a google link: https://console.cloud.google.com/storage/browser/luntergroup/octopus/forests;tab=objects?project=parabolic-eon-208710&pli=1&prefix=&forceOnObjectsSortingFiltering=false but still, I am not able to download the files.

> Hi Any luck with getting the forest files? I see a similar issue with my data. Without forest files it works but I use the forest files it gives...