Hannes Bretschneider
Hannes Bretschneider
I am interested in how to handle IVS variant strings too, as I want to convert variants from older papers in bulk to genomic coordinates. What is the "trivial" solution...
Many thanks @reece. Yes, obviously the only use case for this is converting older sources, but I find that a lot of these are still around. For example, the DBASS...
You are completely right about the issue of missing transcript reference. Of course, some papers were written pre-Human Genome Project and the transcripts they were talking about were not even...
Thanks for contributing @kashif and @andravin. I am currently not using this library myself and therefore also not actively developing it either. If either one of you would like to...
I added both of you as collaborators on the repo.
I don't necessarily think the package needs to *work* in terms of producing a report in a shell, but at least it shouldn't raise errors. I think the closest model...
Update: If I create the background as follows, it works: ```python background_freq = { "A": 0.0825, "R": 0.0553, "N": 0.0406, "D": 0.0545, "C": 0.0137, "Q": 0.0393, "E": 0.0675, "G": 0.0707,...
I think the issue here is that even when the Python values sum up to exactly 1.0 in float64, they no longer do in float32.