Graham Findlay

Results 26 comments of Graham Findlay

Hi Brendon, We (@TomBugnon) have successfully run KS2.5+ on 24h recordings. IIRC, it takes \~24h on a Tesla V100 32GB, but Tom may correct me on that. It is worth...

Thanks, @alowet . This worked for me. In fact, I didn't want to install the full OneAPI toolkit, but found that I could achieve the same result by either using...

If you want to parse the filenames themselves for trigger/gate/run info, here's a snippet I wrote for that and often use ([source](https://github.com/CSC-UW/ecephys/blob/develop/ecephys/sglx/file_mgmt.py)): ```python import re def parse_sglx_fname(fname): """Parse recording identifiers...

If some simple recordings in saline (i.e. non-neural) are okay to get started with, I can make you any testing files you need tomorrow. If I am following everything correctly,...

Tom and I agree with Bill, that supporting CatGT-processed files is a good idea. As Tom mentioned, it is widely used, and as Bill mentioned, it is fastidiously maintained. I...

Yes, you're right @billkarsh. I'm stuck on the old name, but I mean tshift +gblcar. And actually, as you suggest, here in our lab we do something similar to what...

@samuelgarcia Sample data got. I opened a [GIN issue](https://gin.g-node.org/NeuralEnsemble/ephy_testing_data/issues/81) per the instructions at the link you provided.

I am also adding here a collection of CatGT output produced from these sample files. This output uses the latest version of CatGT (v3.0). It should be enough to properly...

Hi Sam, Sorry about that, must have been a mistake. If you check the metadata for the `_tcat_` files, you will actually find a field called `catGTCmdline0` that stores the...

I also had this issue using output from Kilosort 2.5, Windows 10, latest version of phy2. It appears to be caused by closing the ProbeView. More observations: - Once ProbeView...