govind-sah
govind-sah
I have a macMini with 8 gb ram, 3 GHz 6-Core Intel Core i5 processor and only 256 gb hard drive. I was experiencing the storage issue earlier so I...
Hi @rpetit3, I tried to rerun bactopia using just 3 samples (6 fastq.gz files total) this time and still getting error message (see below). [error_message.txt](https://github.com/bactopia/bactopia/files/8794146/error_message.txt). Can you please tell me...
I will try to use docker for this however, since I am not very familiar with it, it am afraid if it will work for me. If possible, please update...
Hi @rpetit3, I tried to run bactopia in docker this time, but was unsuccessful. I just used one sample (S14) for the analysis and got the following errors. [Docker_bactopia_error.txt](https://github.com/bactopia/bactopia/files/8839004/Docker_bactopia_error.txt) I'm...
Apparently, this seem to work initially as it ran for some time but eventually gave me an error :(. My terminal looked something like this (see the file below). [bactopia_errors.docx](https://github.com/bactopia/bactopia/files/8841092/bactopia_errors.docx)...
Sample S14 or any other is not huge. they are in the range of 400-500 mb each file. S14_R1.fastq.gz is 483.3 mb and S14_R2.fastq.gz is 525.2 mb in size. I...
Aaahhhh😓....finally it worked😊! Although some modules did not run, I suppose. This time I used Macbook pro (3.1 GHz Dual-Core Intel Core i7; 16 GB 1867 MHz DDR3) and it...
I have a fairly good internet connection ~200mbps. I will try to run other samples too and let you know the results. Also, I did not understand why it needs...
I used the latest version of bactopia to analyze of my samples, S14. Apparently, it improved compared to the earlier version since I can see better results, however not all...
@rpetit3 Sorry but I could not figure it out on my own. It still gives me an error when running multiple samples together. Did you update it recently? Thanks, Govind