gouwens

Results 5 comments of gouwens

Cannot use cached namespaces from NWB file instead of default

Sure thing. I've attached an example file in a ZIP archive. [Ctgf-T2A-dgCre;Ai14-533670.04.02.02.nwb.zip](https://github.com/NeurodataWithoutBorders/pynwb/files/7306059/Ctgf-T2A-dgCre.Ai14-533670.04.02.02.nwb.zip)

I encountered issues " No module named 'ipfx.nwb_reader'", and I don't know how can I fix this problem. Since I have already installed the ipfx.

Do you have the NWB1 supporting branch as described in the Installation section of the README? You may need to check out that branch and switch to it.

sorry, i failed to run this simulation. Since I encounter this problem "error in ipfx setup command: 'install_requires' must be a string or list of strings containing valid project/version requirement specifiers; Invalid requirement, parse error at "'+https:/'""

This sounds like an issue with getting IPFX installed? Given the other issue you opened (#18) has this been resolved?

Steps to run entire fitting procedure

Thanks for your interest! I have an outline "Getting Started" guide that I never finished & put in the repository, but knowing that someone would make direct use of it...

apfrequency: Make it more robust

The basic spike detection procedure implemented in IPFX is: 1. Identify putative spikes as places where the dV/dt equals or exceeds 20 mV/ms (dV/dt values are taken from a Bessel-filtered...