古郡 まさき

Error: cudaMalloc of 256 bytes for sub_mat failed with error " the provided PTX was compiled with an unsupported toolchain. "

1

run_segalign work/Maspalax.fasta work/Mpsiulurus.fasta --output=test.maf Converting fasta files to 2bit format Executing: "segalign /home/u220220932211/work/Maspalax.fasta /home/u220220932211/work/Mpsiulurus.fasta /home/u220220932211/output_10819/data_17631/ --output=test.maf" Using 2 threads Using 1 GPU(s) Error: cudaMalloc of 256 bytes for sub_mat failed...

Output file size not correct

1

Hi professor, I used SegAlign on GPU V100 32G with 30 CPU, aligning two pika genome (size > 2G), and I get an 800G MAF format output files. What's this...

Wrong assembly of X chromosome

1

I use haphic to anchor a genome to chromosome level but the results may be wrong. The X chromosome was not successfully assembled.