Charity Goeckeritz

Results 11 issues of Charity Goeckeritz

Hi there, Very nice tool you have here!! I'm working with a polyploid (4X) and was wondering if there is an easy way to change the x axis in the...

documentation

Hi there, I've been having trouble getting the test data set to run correctly, so I know something is wrong with the installation... At first, it appeared that I had...

Hi Brentp, I have a sample that's triploid. Any plans to allow smoove to be able to given a ploidy before calling?

Hi Lee, Thanks so much for making this handy tool. I'm trying to use it to calculate genetic differences for some very heterozygous plant species. I am trying to run...

Hi there, I was wondering if bcftools might have a feature I might be unaware of that I've used with other variant callers. I am comparing vcfs in polyploid individuals...

Hi Petr, I've seen some other issues that are similar to this one, but I've not had issues with variable expansion for the filtering expressions until I started using it...

Hi bcftools team, I have a conceptual question about mpileup and I think the -d flag is either being weird or I'm misunderstanding how it works. I am using bcftools...

enhancement
D1: Difficult
htslib-dependent

Hi Alaina, Very nice tool! I was wondering, though, if there was a way the tool could handle polypoids so that the resulting gff is about X times larger than...

Hi bcftools team, Thank you so much for this phenomenal set of tools. If you had a few minutes, I was hoping to ask some questions about the +prune plugin's...

requires-test-case

Hi there, First of all, thank you so much for the wonderful tool. I hope my question will be quick for you all. I've seen your recommendations for adding UTRs...