Givanna Putri

Hi there, I have a few suggestions for the preparation step of the lesson (https://datacarpentry.org/R-ecology-lesson/index.html): 1. For installing R and Rstudio, I think the Rstudio website has change since the...

There are many Github actions available for R package. We should implement some of them for the master branch (push and pull request). https://github.com/r-lib/actions/tree/old

Use here package to replace setwd in all functions

1

We used `setwd` a fair bit in functions which need to reference (read or write) files, which is not great as `setwd` is fragile and very dependent on the way...

Centroid label missing if the x and y range is < 1

3

When making colour plots coloured by a factor type label, the centroid text labels are missing if the x- and y- axis range is < 1. In UMAP or tSNE...

How to load Merscope data missing cell_boundaries.parquet file?

6

Hi there, Is there a way to load older version of merscope data which store the cell boundaries as several hdf5 files rather than a parquet file? I'm hoping to...

Currently ChronoClust produces a csv file showing the cluster id of each data point as well as the values of the data point. To simplify the output, it should just...

pkgdown have problem installing packages that are only available in github, and some packages in suggest are only on github. Temporarily, the following has been removed from the DESCRIPTION file:...

Support for test_active_file in vscode

1

I'm moving away from rstudio towards vscode. Unfortunately, function like `test_active_file` still doesn't work on vscode. I guess it is because it relies on rstudioapi to detect what file is...