Antonio Fernandez-Guerra issues

Results 5 issues of


                                            Antonio Fernandez-Guerra

Easy-taxonomy and floating point exception

Hi I am having some strange behavior when using the easy-taxonomy with a query with only one contig. Here you can find the [contig](https://github.com/soedinglab/MMseqs2/files/6821433/477fb4bafa.assm.refined.fasta.gz) and the [log](https://github.com/soedinglab/MMseqs2/files/6821435/477fb4bafa.contig-taxonomy.GTDB.log) I don't think...

MPI local-tmp

Hi does PLASS have the option for `--local-tmp` like in MMseqs2 for MPI jobs? I checked the Thanks Antonio

Using already predicted ORFs from reads

Hi I would like to use the ORFs that I predicted using another approach. I checked the documentation and I haven't seen an option to deactivate the `extractorfs` step. Is...

Unbiased DFA

Hi @stfbnc thank you very much for your package. It is super useful. I was wondering if fathon could include the unbiased DFA for short time series as is described...

HIBF creates a very large index

Hi I have been trying to build an index of a large collection of microbial genomes (102999) using HIBF and the resulting index is way larger than when I create...