gabepen

Checking in on the progress for this. I'm also having issues downloading WP accessions, specifically many within the gammaproteobacteria subtree are failing with the zip archive error. I am getting...

@ericcox1 It depends on each query. It doesn't seem to be a gene dataset size issue though, I've tested the --taxon-filter option and still get the zip archive error for...

@ericcox1 I thought I was getting the error for taxon without a genome labeled as a reference but I tested it with this taxon and received the same error: ```...