Ross Lazarus

Could this be related to #1098 ?

This may be related to #1078 - planemo seems to leak venv dependencies into the calling environment. I've worked around this for now - getting planemo in Galaxy as a...

Interesting re #1097 ? tl;dr **seems to be some leakage into the host python venv/conda env from planemo testing.** In a docker container, if a test run uses (for example)...

Will take a look. For bonus points, if planemo is run as a tool it tries to call run_test.sh with --dev-wheels which fails since it's not defined as a parameter....

Oddly enough, AFAIK, CC is not OSI approved - apparently because it's not intended for source code! In the long run, OSI approved licensing as suggested by @logankilpatrick might make...

Decision boils down to whether the minor complication of a separate (non-OSI-approved!) license for marked up text and images is a good strategic choice - which it is if it...

Thanks for confirming @dannon's solution @hexylena - that's a really good reason and precedent for dual licensing. Yet another thing that I didn't know about...

Thanks for merging @dannon That makes this issue completed AFAIK - time to close? @logankilpatrick - does the merge suit your requirements now or is there more needed?

@cmdcolin **tl;dr: After playing with some very dense tracks, I think lower feature densities work pretty well in JB2, but an automated switch to binned count bar display at some...

@cmdcolin For my own use case will convert the underlying workflow to make a bigwig but have given the Galaxy JBrowse2 user the choice of a _LinearPileupDisplay_ for enormous bed...