Andrew Freiburger

FileNotFoundError

1

Hello, I receive this error ```console Latex error: check your latex file and preamble. CMD executed: xelatex "-output-directory=C:\Users\ANDREW~1\AppData\Local\Temp\writetex-bvhwybqn" -interaction=nonstopmode -halt-on-error "C:\Users\ANDREW~1\AppData\Local\Temp\writetex-bvhwybqn\writetex.tex" > "C:\Users\ANDREW~1\AppData\Local\Temp\writetex-bvhwybqn\writetex.out" Traceback (most recent call last): File "writetex.py",...

Hello! I receive the attached error  that the solver cannot be set through the `changeCobraSolver` function, despite that is what is demonstrated in [the docs](https://opencobra.github.io/COBRA.jl/stable/tutorials.html#Define-and-change-the-COBRA-solver-1). The corresponding files are...

Hello, I believe that the description of each ORF would be more accessible as a dictionary, instead of a string that is delimited with `;`, `:`, and `=`. I am...

I believe that the MSCommunity code is dependent on several new functions in MSModelUtl.

Bugs

1

Hello! I merged the upstream MSpy into my fork and was reacquainted with some bugs that I corrected in my fork. A few of them here: 1. `Self` is already...

Predicting abundance but requiring abundance

5

I'm confused why MICOM returns the arbitrary initial abundances in the `grow` results. I thought that MICOM predicts the abundances of a given community; is this not true?