He Shen

Hi @rasbt , I've encountered a problem when using GridSearchCV and cross_val_score. I embedded GridSearchCV (inner cv) in cross_val_score (outer cv) according to the method written in your book (Python...

I removed the specified channel: 'default' for these two packages and it worked but a new problem has arisen: Seems like 'gatkPythonPackageArchive.zip' doesn't exist and there's no 'condaenv.1vzdcdw2.requirements.txt' in 'assets'...

Thanks @riederd and I am now using the singularity instead of conda/mamba. To do a quick test, I use the provided test data: 'nextNEOpi_testdata.tar.gz' with commands: `nextflow run nextNEOpi-master/nextNEOpi.nf \...

Hi, Here is the compressed file: [020fb154a5b67d3d4cd282f388c509.tar.gz](https://github.com/icbi-lab/nextNEOpi/files/12617587/020fb154a5b67d3d4cd282f388c509.tar.gz)

Hi, please check the compressed file below and thanks in advance: [020fb154a5b67d3d4cd282f388c509.tar.gz](https://github.com/icbi-lab/nextNEOpi/files/12670169/020fb154a5b67d3d4cd282f388c509.tar.gz)

Hi, Here is the output:  `['', '/home/heshen/01.project/01.neoantigen/00.biosoft/hisatgenotype/hisatgenotype_modules', '/home/heshen/01.project/01.neoantigen/01.project/nextneopi/test/testdata/work/49/020fb154a5b67d3d4cd282f388c509', '/opt/conda/lib/python38.zip', '/opt/conda/lib/python3.8', '/opt/conda/lib/python3.8/lib-dynload', '/opt/conda/lib/python3.8/site-packages']`

Hi, I've checked that the path you mentioned doesn't exist both inside and out of the container:  But it is a little bit strange that `sys.path`...

Hi, I rerun `bash .command.run` and it comes into the same error as before: `ValueError: Input X contains NaN.`. I check the files in `MHC_Class_I/tmp` folder and find that `*MHCflurry*.9.*`...

@tpoisonooo 谢谢大佬～ 1. 对于第一个问题我有个疑问，在开发机上同样碰到scoring没有指令跟随的问题，但还是生成了结果（而本地却生成不了，不知道可能的原因是什么）： 感谢大佬的建议，用Qwen/Qwen1.5-14B-Chat做了测试，不过只有一张4090，确实OOM了。准备测试更小的模型，不知道您有什么建议？感谢～ 2. 第二个问题，降低阈值后（0.3），worked！ 另，本地下载的是[internlm/internlm2-chat-7b](https://hf-mirror.com/internlm/internlm2-chat-7b/tree/main)

好的，谢谢大佬～ 不知道在实际商用（比如某个垂域使用）时，大佬根据您过往的经验，qwen 7B fp16 或者 qwen 14B int8 是不是也ok够用了？再次感谢～