Felix Hofmann

regarding this, reusing 'converted_dcm.nii.gz' would be great. currently, the transformation to *.nii is done in nnUNet_predict_image. as the input directory or file_in in the pipeline itself is not changed, each...

hi louis. sorry for the misunderstanding. if you would try to combine two segmentation jobs (e.g. spine+bodycomposition AND organs) in a single pipeline as far as I understand `nnUNet_predict_image` and...

haha, same idea, same class name, ... [L6](https://github.com/fohofmann/Comp2Comp_lw/blob/2fbfa563c4e780fb8f8886b7f3cff635abbb38d6/comp2comp/io/io.py#L6). sorry for the quick 'n dirty approach, its just to implement the pipeline in a more restricted HPC environment... anyway, the missing...