Fredrick M. Mobegi

I figured your data for allocating products come from InterPro scan; ironically, the EC numbers + product names don't always match whatever you get from BRENDA or EXPASSY `wget https://ftp.expasy.org/databases/enzyme/enzyme.dat`....

I will try run ECpred and then compare the annotations with IPRscan

Finished the `ECPred` analysis. See the attached results. Some of the EC: numbers are matched, a few are off. As for the description, Most of the "product names" assigned by...

I think it's fine using a strict filter that will exclude EC# altogether if the description is "hypothetical" or the EC is non-definitive. Where the EC# is determined to 4...

Hey Jon, Just a quick update on this issue. After fixing the product names, we came across another related issue. ## The placing of product="abcd" Under what category of column...

Check if you have '*' in your fasta file. That could be the issue. Alternatively, just run phobius as a standalone process and feed the results to the annotation command>...

@aberaslop .. Welcome. But you might want to investigate if you have in-frame or premature stop codon if any. Could be that you've sequenced a pseudogene or you just have...