FLYu
encounter the same issue..
Thank you so much for reporting the bug and sharing the solution!! I will keep this in case other users run into the same issue, thank you!
Hi Ryan! Can you post the sizes of files that are generated by you and CTRTools2.0? Do you check the fragment size distribution? I figure you may filter out too...
Thank you Brian for working on this. I think I was a member of https://github.com/sankaranlab, but I am not sure if I was a public member. How can I confirm...
I just set myself public while it still does not work. I wonder if this is possibly the case. https://github.com/actions/upload-artifact/issues/232
> Hey @fl-yu , just checked up on this and it seems that SCAVENGE is getting through all steps except the very last one on Linux when trying to push...
Hi We appreciate your interest in our work. Would the following information be beneficial to you? https://github.com/sankaranlab/SCAVENGE-reproducibility/blob/main/data/finemappedtraits_hg19/covid19hg_B1_FMdata.txt
Hi thank you for using our tool! This is a tricky problem that we are still thinking about how to resolve it properly. We realized that setting a seed is...
Hi Joaquin! Thank you for your interest in our tool! Sorry for the failed installation of chromVAR but I can not figure out the reason based on the error message,...
Either one could be good! After you installed R 3.6 or 4.0 in a clean conda env, you may proceed to install R packages using Bioconductor in R session