François Keck

Doesn't work: ` c("Yo", "Ya")` Works: ` c('Yo', 'Ya')`

Improve printed messages in the console using cli (https://github.com/r-lib/cli#readme) Add option to hide printed messages

Assess and fix compatibility with the new base R pipe operator https://stat.ethz.ch/R-manual/R-devel/library/base/html/pipeOp.html

- [x] seq_detect_pattern 3277d1605d1600c75781606d7b0a8daf13d3948b - [x] seq_crop_pattern b033d3e46525ee71e6179831c439a8ecb0ab588c

Functions to check: - seq_translate - seq_rev_translate

They are currently missing because merged with other table: Table 7 -> table 4. Table 8 -> table 1 But we could add and link them for compatibility with data...

Add functions `read_fastq` and `write_fastq`. Although `bioseq` is not really designed to work with raw HTS data, this can be useful sometimes.

Currently genetic codes are identified by their number in functions like `seq_translate`. Add possibility to use a text string instead.

Suggestion by Prof. David Gray (email): Add the possibility to test phylocorrelograms using a Brownian motion model as null hypothesis (instead of no correlation at all, as currently implemented). Could...