fjell-dev

Results 4 comments of fjell-dev

I think you need to open/input all of the files in the `result_pdb` folder at once in PyMOL (or other molecular visualization software). Then you can see how they are...

Having the same results also. It looks like that the fasta file output from the command contained some empty sequences and diamond could not create the database. Cblaster did not...

I used this command to remove the empty sequences in my large FASTA file `sed -i 'N;/\n$/d' large_file.fasta` (use at your own risk) and use the `diamond makedb` command successfully....

> I resolved the issue by adding the necessary binding path to the singularity scope in nextflow.config. I am new to nextflow, so this might not be the best solution....