Alex Wolf
Alex Wolf
Oh, I have a package that I install with flit, and anndata is a dependency. It all worked fine until yesterday, until this error started to appearing, either due to...
I think `pip install -e` doesn't recognize extras like `doc, test` when they're in `pyproject.toml`. Or am I getting something wrong? ``` pip install -e .[doc] ``` This also fails...
Thank you, Phil! I think it was indeed just a lack of escaping `[`. pip now works for me.
@chaichontat, thank you for the in-depth elaboration and proposals! I agree on the downsides of the present in-place data science workflows that you're pointing out. I agree with @Zethson that...
Thank you very much for the review, @rcannood! We'll get back to you!
I'm sorry it takes us so long. We need a bit more time to compile the benchmarks we have. We'll get back in a week.
Robrecht! Apologies for the slow response! Thank you very much for the in-depth review. It definitely helped us improve the paper! **General issues** * We fixed the repository link! https://github.com/scverse/anndata/pull/779/commits/d409c48ec8ca26707f149fcd23cffbdf970d9f5b...
Thanks a lot for this second round, @rcannood! (Why am I so slow in responding? Sorry!) I pinged the editor re the repo location and am talking to @ivirshup about...
Thank you for this in-depth review! It provides very valuable feedback! We'll thoroughly respond, but it's likely gonna take a little time.
Hi @rcannood, @ivirshup and I made a list and we worked out many of them (e.g., benchmarking). We'll definitely get back. I'm sorry that I on my end got much...