Ezra Herman

Hi @zkamvar, I was wondering whether there have been any developments in this space. Is there a preferred way of integrating glosario definitions into Carpentries Incubator lessons? I would be...

Sounds good @zkamvar, thank you!

I realise this is old now, however the question still seems relevant. Would you be able to comment on my answer, @rrwick? The Phred score is calculated using the probability...

To add to this, the following was sufficient for me (without specifying a python version or updating the conda environment): `conda create -n assembly -c conda-forge -c bioconda fastp -y`

@jakevc @johanneskoester would it be possible to get your thoughts on the above? Is there currently support for Azure Batch, and if so, where is the most up-to-date documentation? I...

Thanks for getting back to me! Good to know that trimming is unlikely to be the source of the issue, and that MinKNOW and dorado standalone should perform similarly. By...

@billytcl did you get a chance to give this a go? I am interested in your result too!

There is currently a discussion on the Snakemake discord server on whether to change the default behaviour of `--rerun-triggers` to something closer to what it used to be. So now...

Hi Tim, one thought on how ep06 could be shortened: "Option 3: Using a `directory()` output" could be cut. Instead, `directory()` could be introduced in the section on Salmon. I...

> Here are the benchmarks - in brief, `fastgather` is quite fast, while the rocksdb implementation is very low memory: > > [#3232](https://github.com/sourmash-bio/sourmash/issues/3232) Hi! I was wondering whether `fastgather` is...