Phil Ewels
Phil Ewels
Hi there, Many thanks for merging the recent PRs. We're currently using the `master` branch until a release goes out so I noticed the updates pretty quickly. After patching our...
New base module function `group_samples()` for bundling samples into groups, such as read pairs. A default config added and FastQC module updated to make use of the read pair grouping....
Changes initially based on code submitted by @asalhab. See issue #381 for origin of discussion.
### Description of feature Copying from nf-core/tools, but I think it makes sense here too: Use XDG: https://specifications.freedesktop.org/basedir-spec/basedir-spec-latest.html Keep all configs under `~/.config/` (aka most `$XDG_CONFIG_HOME`) instead of in the...
### Description of feature https://github.com/asottile/blacken-docs
- [x] Check privacy policy - [x] Add postcodes - https://github.com/BustByte/coronastatus/pull/319 - [x] Write translations - https://github.com/BustByte/coronastatus/pull/419 - [x] Make a `se` wordlist for passwords - [x] Configure URL paths...
This tool looks amazing 🤩 Any chance of a slight refactor so that I can import it into my tool and use it to render diffs that I already have...
_From @Hammarn on March 22, 2017 8:19_ It would be useful to supply examples of a good/expected output for all our supported programs. Or we should at least specify wether...
### Description of feature We should probably be outputting CRAM files as default instead of BAM (it is an nf-core [recommended feature](https://nf-co.re/developers/guidelines#recommended-features) in the guidelines, after all). This was mentioned...
_From @ewels on March 8, 2017 9:0_ The current MultiQC plot for dupRadar is a little tricky to interpret. Instead of plotting the dotted line from this plot as is...