evanbiederstedt

This is unfortunate, precisely because largeVis could easily be added as a dependency to other CRAN or Bioconductor packages if it was on CRAN. Perhaps there's a resolution with the...

BTW, I'm happy to help out on this front, if it's useful.

> If anyone has a solaris machine, that would be helpful. I was thinking Docker images may help us here, but I'm not convinced that's available. ~I'm surprised they don't...

@elbamos I'm interested---especially as I'm interested in seeing what the cause of the issue was. I'm dealing with this on other fronts.

Hi @elbamos Thanks again for taking the time to look into this---I'm interested in finding out what's going on. > @evanbiederstedt If you want to look at the travis configuration,...

Hi @elbamos Sorry---I got a bit distracted by life. > Would you folks mind giving a try to the version currently in the /feature/backoncran branch? In particular, let me know...

Hi @tobiasrausch Thank you much for the prompt reply. > For the GC content, you will still have the sample and reference GC distribution but in addition the GC distribution...

Hi @hiraksarkar You'll have to write a method. There's more details here: https://github.com/satijalab/seurat/issues/3033 Note that `subset()` is a S3 method, which you could modify for the package. For example of...

@hiraksarkar I started writing up a function to do this, beginning with the normalized matrices (not cells in the cluster): ``` #' Applies downsampling uniformly to all samples in a...

Hi @kristiangu Thanks for the issue. By "feature loadings", I'm guessing you mean something like defined by Seurat? https://satijalab.org/seurat/v3.0/dim_reduction_vignette.html > **2. feature.loadings:** stores the weight for each feature along each...