etod5987

Hi Mike, I ran the setup command again, please find the error output file attached. Thanks so much for your help, Emma On 3 Jul 2021, at 5:38 am, Michael...

[DRAM_setup_error.txt](https://github.com/shafferm/DRAM/files/6794333/DRAM_setup_error.txt) Hi Mike, sorry, didn't realise it wouldn't upload automatically!

I believe so but I will double check. On 17 Jul 2021, at 8:56 am, Michael Shaffer ***@***.******@***.***>> wrote: It looks like DRAM can't find mmseqs2. Did you install mmseqs2...

So turns out I didn’t have mmseqs2, but now I do I ran it again and it created more files this time, but still came up with an error: Traceback...

Hi Rory, Thanks for the suggestion! Here is the output of the mmseqs create index command. I will also now run DRAM_setup with verbose attached. MMseqs Version: GITDIR-NOTFOUND Seed substitution...

Hi Michael, I realised the lack of memory was the problem, changed the allocation, and all the databases downloaded! However, the location of the databases hasn’t saved into the config...

I am working on an institution HPC, I’ve tried to load in all the dependencies but I’m not sure if we have all of them installed. I’m going to be...