Eike Steinig
Eike Steinig
Different issue with `bcftools` after fresh Conda installation in contig and read inputs ``` [02:25:53] Running: bcftools view --include 'FMT/GT="1/1" && QUAL>=100 && FMT/DP>=10 && (FMT/AO)/(FMT/DP)>=0' FNQ-8.raw.vcf | vt normalize...
So the `[fai_fetch_seq]` was actually a problem with the version of `vt` - for some reason it got downgraded in my environment. Check version of `vt` in current environment: ```...
Recreate without searching for all sequences: `bionode-ncbi search sra PRJEB2478`
Hello! At the moment the thresholds are hard-coded, although that could probably be changed, as they are pretty arbitrary. I'll flag it for the next release as a feature, thanks...
Love Wei Shen's work - and of course it was available ^^ I'll flag this for the next version. There should be a fast way of doing this using the...
Thanks so much Hasindu. It's not a rush, mostly for convenience to be honest! I suppose it was a good motivator to familiarize myself with the `slow5-rs` library, which has...
Absolutely, kudos to @bsaintjo - really nice design patterns, learning a lot about how to handle C library integration! Really interesting idea to snakeball the dorado-server binary with `buttery-eel`. Do...
Hey James, long time, nice to get back in touch after me disappearing from social media completely :) I do miss your SciFi book recommendations ^^ I thought as much,...
Hey @emics57 I can put a quick binary with converter together for you. Are you running this on a Linux system?
Ah thanks @hasindu2008 @Psy-Fer better than running some sketchy binary 👀 I'll leave you with the update then!