enonimos

Results 4 issues of enonimos

Hello, I am performing phosphoproteome-based closed searches with LFQ and have a question/clarification about the PTMProphet output. I appreciate the report format as it provides indexed and localized sites with...

Philosopher
IonQuant

Hello, I have been using the isobaric quant tool in FragPipe 17 and now version 18, and I wanted to report an unexpected result when using different "ratio to abundance"...

TMT-Integrator

**Is your feature request related to a problem? Please describe.** My feature request would serve as additional value added to IonQuant outputs. This request was stimulated by discussions with @fcyu...

enhancement
IonQuant
low-priority

Hello, Thank you for all the updates in the new FragPipe v21. I was curious to test out the new TMT Integrator version that uses IonQuant. Running the default TMT16...

IonQuant