emirzakh

Tensor cores or cuda cores?

21

When setting up a new PC to run AlphaFold locally, should I look for a GPU with more tensor cores or cuda cores? For example, are we better off going...

Another crosslinking and database partitioning issue?

10

Hi, I've noticed that when you adjust the database partition size, the number of identified inter and intra-protein crosslinks, above 1% FDR, increase 5-10 fold. My protein databases are fairly...

Isoforms and protein link site

1

Is there a way to prompt MM to report multiple protein link sites in the xl search output? When a peptide is present in two isoforms or in the rare...