Eugenio Mattei

[BUG] Support for combinatorial barcode indexing(like SHARE) not present

3

Hi, I am interested in using chromap to run SHARE-seq data. The barcodes come from three rounds and splitting and pooling. These three barcodes (8bp each) should be corrected individually...

[BUG] Manpage is down

1

The link to the documentation is broken.

Definition for the alignment metrics in output

2

Hi, I was looking for the definitions of each of the alignment metrics that are output by chromap: Number of reads Number of mapped reads Number of uniquely mapped reads...