Ehsaneddin Asgari comments

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                                            Ehsaneddin Asgari

Batch support in seq2seq tutorial

Hi, Thank you for the great work! Would you please add batching to the tutorial as well?

could you upload the biophysical features for 20 standard amino acids?

Hi there, sorry for the late response. Please find it here: http://deepbio.info/proteomics/datasets/deepprime2sec/train_files.tar.gz. The training file contains every feature concatinated. Please refer to the README and if you had further questions...

where the X_test_408.npy?

You could find it here: https://github.com/ehsanasgari/DeepPrime2Sec/tree/master/datasets

where the X_test_408.npy?

You're very welcome. The npy file is also there: "test_mat_Y.npy". Are you looking for something else?

where the X_test_408.npy?

I thought this is also the same as X_test_408. But will check this later and if was not the same will upload the correct file.

Plan to release this?

Sure, I am currently busy, but I am going to release some of the data and codes soon. Maybe by late August. Are you looking for something specific?

Missing vectors

As you figured it out, they are rare 3-grams which are considered as unkown in representation learning. We are going to publish a new version which covers those too. One...

File not found

I am trying to use Sharif Judge for a simple string manipulation problem. The problem is to permute a word in specific way. So I made test files (zip file:in>input1.txt...