Wenyu (Eddy) Huang

> Thank you for reporting an issue. Could you provide the genome files so that I can reproduce the error? It would help me a lot in solving the issue....

would symlinks work?

> would symlinks work? I just tried and it doesn't work. I have all my fasta files stored in subdir as archaea, bacteria, viral, etc. All other tools can be...

> Hi, > > symlinks unfortunately do not work at the moment. I have to investigate what I will need to change to make it possible. In the meantime, the...

> You can try `conda install taxor=0.2.0 -c bioconda -c conda-forge`. This worked for me. Yes! Thank you. I actually just resolved the issue

Should command like this work? `taxor build --input-file refseq_accessions_taxonomy.csv --input-sequence-dir library_gz/archaea/,library_gz/bacteria/,library_gz/fungi/,library_gz/viral/ --output-filename ./taxor_abfv_030325/refseq-abfv-k22-s12.hixf --threads 32 --kmer-size 22 --syncmer-size 12 --use-syncmer` I ran into the following error: > checking input ......

> Taxor complains that there is no file name `GCF_036169615.1*.fna.gz` in your input directories. Besides that, there is an error in the command in front of the `--output-filename` parameter. Looks...

Hi, I want to confirm the specificity of building customized database with ncbi refseq. I have latest refseq assembly genomes downloaded from https://ftp.ncbi.nlm.nih.gov/genomes/refseq/ Q1. How can I build and index...